Download Application of Graph Based Data Mining to Biological by You Ch.H. PDF

By You Ch.H.

Show description

Read Online or Download Application of Graph Based Data Mining to Biological Networks PDF

Best bioinformatics books

Proteomics and Protein-Protein Interactions: Biology, Chemistry, Bioinformatics, and Drug Design (Protein Reviews)

The swiftly evolving box of protein technological know-how has now come to gain the ubiquity and value of protein-protein interactions. It have been identified for it slow that proteins may well have interaction with one another to shape useful complexes, however it used to be regarded as the valuables of just a handful of key proteins.

Bioinformatics of Genome Regulation and Structure II

Bioinformatics of Genome law and constitution offers chosen papers from the Fourth foreign convention on Bioinformatics of Genome legislation and constitution (BGRS), held in Novosibirsk, Russia, in July 2004. The convention was once geared up via the Laboratory of Theoretical Genetics, Institute of Cytology and Genetics, Siberian department of the Russian Academy of Sciences, Novosibirsk, Russia.

Advances in Molecular and Cell Biology

The fourth quantity of the ''Advances in Molecular and telephone Biology'' sequence. mobile biology is a rapidly-developing self-discipline, bringing jointly many separate organic sciences. The interrelations of phone constitution and serve as at molecular and subcellular degrees are the significant subject matter of the sequence

RNA Nanotechnology and Therapeutics: Methods and Protocols

This quantity features a compilation of strategies and laboratory protocols at once with regards to RNA nano expertise and its purposes in nano biotechnology and nano drugs. The chapters during this publication conceal quite a lot of examine tools that may be simply comprehended and conducted in a step by step demeanour by means of graduate scholars and postdoctoral fellows from varied medical disciplines.

Extra resources for Application of Graph Based Data Mining to Biological Networks

Example text

By the following, DNA → RNA → P rotein → f unction, gene expression is regulated at many molecular levels [61, 55]. Three categories of biological networks would be considered as two groups: Metabolic network and Protein-protein Interaction. The first one is the network of various objects and their relations, but the second one is the network of interactions between proteins [62]. 4 Computational Analysis of Biological Networks As mentioned in the previous section, the biochemical pathway is the complex in- teraction between molecules such as biochemical compounds, protein and other genetic materials.

Metabolism can be divided into two categories: Catabolism 22 23 and Anabolism. Catabolism is the degradation phase in which organic nutrient molecules are converted into smaller and simpler compounds, sometimes while releasing energy for biological activity. Anabolism is called biosynthesis in which small and simple molecules are built up into larger and more complex molecules, such as polypeptide, polysaccharide and triacyglycerols [52, 55, 54]. 1 Biochemical compounds A cell and its organelles are composed of many biochemical compounds.

Some unique names of entries posed potential problems when we run Subdue on the the named-graph, because KGML data has several unique names. 9 as its name acts as D-glucose-6-phosphate phosphohydrolase in the Glycolysis biological network. Generally this enzyme is found only in the glycolysis pathway. Therefore if we try to find the best substructure to distinguish this network from others, just one pattern, this name, is found by Subdue. There is less need to have the unique name of each entry, because our research goal is to analyze patterns of biolog- 46 ical networks.

Download PDF sample

Rated 4.88 of 5 – based on 45 votes